BLASTP 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1137538546-25446-119806628314.BLASTQ1


Database: Non-redundant SwissProt sequences
           188,444 sequences; 70,040,827 total letters
Query=  MusDpl 
Length=179


                                                                   Score     E
Sequences producing significant alignments:                        (Bits)  Value

sp|Q9UKY0|PRND_HUMAN  Prion-like protein doppel precursor (PrPLP)   282    4e-77

ALIGNMENTS
>sp|Q9UKY0|PRND_HUMAN Prion-like protein doppel precursor (PrPLP) (Prion protein 2)
Length=176

 Score =  282 bits (722),  Expect = 4e-77
 Identities = 130/179 (72%), Positives = 149/179 (83%), Gaps = 3/179 (1%)

Query  1    MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAF  60
            M+  L  WW+A +CMLL SHLS V+ RGIKHR KWNRK LPS+  QITEA+VAENRPGAF
Sbjct  1    MRKHLSWWWLATVCMLLFSHLSAVQTRGIKHRIKWNRKALPSTA-QITEAQVAENRPGAF  59

Query  61   IKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAE  120
            IKQGRKLDIDFGAEGNRYY ANYWQFPDGI+Y GCSEANVTKE  VT C+NATQAANQ E
Sbjct  60   IKQGRKLDIDFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINATQAANQGE  119

Query  121  FSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK  179
            F  +K D+KLHQ+VLWRL++E+CS KHC+FWLERGA LRV + QP ++CLL  +W  VK
Sbjct  120  F--QKPDNKLHQQVLWRLVQELCSLKHCEFWLERGAGLRVTMHQPVLLCLLALIWLTVK  176



  Database: Non-redundant SwissProt sequences
    Posted date:  Jan 16, 2006  7:35 AM
  Number of letters in database: 7,254,987
  Number of sequences in database:  13,424
Lambda     K      H
   0.324    0.135    0.439 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13424
Number of Hits to DB: 667830
Number of extensions: 26236
Number of successful extensions: 71
Number of sequences better than 1e-10: 0
Number of HSP's better than 1e-10 without gapping: 0
Number of HSP's gapped: 71
Number of HSP's successfully gapped: 0
Number of extra gapped extensions for HSPs above 1e-10: 71
Length of query: 179
Length of database: 7254987
Length adjustment: 90
Effective length of query: 89
Effective length of database: 7254987
Effective search space: 645693843
Effective search space used: 538167603
T: 11
A: 40
X1: 15 (7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.0 bits)
S2: 150 (62.4 bits)